Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 AL138781.2-201ENST00000617896 1843 ntBASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-1A0A0B4J245 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 pRNA.6-201ENST00000610482 90 ntBASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 pRNA.5-201ENST00000612139 90 ntBASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 pRNA.11-201ENST00000618423 90 ntBASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 pRNA.13-201ENST00000619112 90 ntBASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-1A0A0B4J245 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-1A0A0B4J245 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 AC021242.3-201ENST00000607598 1377 ntBASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 TREX1-205ENST00000625293 1783 ntBASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms