Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 KRT18P14-201ENST00000534205 1250 ntBASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 SLC7A5P2-201ENST00000553010 536 ntBASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 MIR2861-201ENST00000636310 90 ntBASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV30A0A087WSZ9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 KRT19P1-201ENST00000405746 1186 ntBASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV30A0A087WSZ9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV30A0A087WSZ9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms