Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP000280.1-201ENST00000624800 832 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 RANBP2-205ENST00000629728 156 ntTSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 LINC00581-201ENST00000630914 990 ntTSL 3 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AL162456.1-201ENST00000634535 2006 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC016582.1-202ENST00000636341 2982 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 VNN3-212ENST00000519686 1377 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 FBXW11P1-201ENST00000393804 1474 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL445250.1-204ENST00000641775 1723 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 DUSP21-201ENST00000339042 885 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 RN7SKP110-201ENST00000410146 285 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL589763.1-201ENST00000412257 791 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 HSPB1P1-201ENST00000423240 256 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL662789.1-201ENST00000448198 724 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC022701.1-201ENST00000462935 622 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL645949.1-201ENST00000510094 324 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AP000866.3-201ENST00000534607 433 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL442663.4-201ENST00000555304 289 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 RN7SL138P-201ENST00000577405 287 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC103810.1-203ENST00000583052 599 ntTSL 4 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL645949.1-202ENST00000600073 242 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 SRGAP2D-201ENST00000605551 1021 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL080285.2-201ENST00000612765 458 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 PKP4-218ENST00000629219 162 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL034408.1-201ENST00000637712 664 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 LINC02211-202ENST00000641091 839 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL023806.3-201ENST00000638502 2704 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AC011893.1-201ENST00000437007 1862 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 AL391666.1-201ENST00000442570 2764 ntBASIC7.81□□□□□ -1.16
SNX18Q96RF0 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.81□□□□□ -1.16
SNX18Q96RF0 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNX18Q96RF0 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC7.8□□□□□ -1.16
SNX18Q96RF0 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC7.8□□□□□ -1.16
SNX18Q96RF0 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC7.8□□□□□ -1.16
SNX18Q96RF0 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC7.8□□□□□ -1.16
SNX18Q96RF0 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC7.8□□□□□ -1.16
SNX18Q96RF0 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC7.8□□□□□ -1.16
SNX18Q96RF0 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SNX18Q96RF0 ERG-206ENST00000398911 4914 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms