Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 SMARCAL1-202ENST00000358207 3056 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 HSPA9P1-201ENST00000432228 2029 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 IPO7P2-201ENST00000451446 1750 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC112512.1-201ENST00000398957 1428 ntTSL 2 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 MT-TS1-201ENST00000387416 69 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 SLC8A1-AS1-203ENST00000418854 545 ntTSL 4 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 RPS28P8-201ENST00000435020 208 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 RN7SL745P-201ENST00000484900 299 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 ELL2P2-201ENST00000515135 694 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 MRPS27-207ENST00000515404 1183 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AP005597.3-201ENST00000532369 799 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 RAN-211ENST00000541679 572 ntTSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC089998.3-201ENST00000549715 493 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 MIR4450-201ENST00000583589 65 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC007161.2-201ENST00000604734 1109 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 ELMO2P1-202ENST00000614283 794 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC009093.6-201ENST00000622268 553 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 Z98043.1-201ENST00000624123 339 ntBASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPIPA3F8WFD2 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 PUS3-205ENST00000613398 1419 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 OR5E1P-201ENST00000305754 927 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 RN7SKP37-201ENST00000364494 296 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 RN7SKP154-201ENST00000410136 290 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 WBP1LP7-201ENST00000437905 363 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AC006534.1-201ENST00000469329 541 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 RN7SL685P-201ENST00000476271 298 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 STMN2-203ENST00000518491 585 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 SNRPCP14-201ENST00000524498 205 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 PGAM1P8-201ENST00000526979 453 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms