Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ST7-213ENST00000432298 1956 ntTSL 2 BASIC7.9□□□□□ -1.15
SNX18Q96RF0 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 DMKN-205ENST00000414866 867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 RPL6P21-201ENST00000418672 846 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TPM3P4-201ENST00000425942 755 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC006355.1-201ENST00000440982 1012 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 GRPEL2P3-201ENST00000448626 640 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 RN7SL541P-201ENST00000464317 283 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AP005135.1-201ENST00000532071 714 ntTSL 3 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC018554.2-201ENST00000563482 261 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 FRG2KP-201ENST00000565692 971 ntTSL 3 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 ZNF283-205ENST00000590950 466 ntTSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC010320.3-201ENST00000594865 447 ntTSL 3 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 ARMCX7P-202ENST00000602449 655 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC245505.3-201ENST00000616788 358 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 OR1B1-201ENST00000623530 995 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AD000813.1-201ENST00000624007 832 ntBASIC7.89□□□□□ -1.15
SNX18Q96RF0 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.89□□□□□ -1.15
SNX18Q96RF0 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SNX18Q96RF0 MGAM2-203ENST00000550469 1591 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 GSDMB-204ENST00000394179 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC022150.4-201ENST00000598322 2848 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 LDHAP4-201ENST00000397561 998 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 OR2A12-201ENST00000408949 1046 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AL023773.2-201ENST00000412173 1005 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 RFX3-AS1-202ENST00000427722 1088 ntTSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC012497.1-201ENST00000429392 575 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 IFNA22P-201ENST00000458710 570 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC104619.1-201ENST00000459634 631 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC006534.1-201ENST00000469329 541 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC091152.1-201ENST00000472109 838 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC112719.1-201ENST00000477971 315 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC010307.2-202ENST00000502776 570 ntTSL 4 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms