Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 REXO1L12P-201ENST00000622156 912 ntBASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 AC023632.3-201ENST00000521633 145 ntBASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 MAX-217ENST00000557277 728 ntTSL 3 BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
BIVM-ERCC5R4GMW8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 MIR1224-201ENST00000408193 85 ntBASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 AL353708.3-201ENST00000610272 989 ntBASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
BIVM-ERCC5R4GMW8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
BIVM-ERCC5R4GMW8 AL121906.2-201ENST00000621597 723 ntBASIC34.26■■■■□ 3.08
BIVM-ERCC5R4GMW8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC34.26■■■■□ 3.08
BIVM-ERCC5R4GMW8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC34.26■■■■□ 3.08
BIVM-ERCC5R4GMW8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
BIVM-ERCC5R4GMW8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
BIVM-ERCC5R4GMW8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
BIVM-ERCC5R4GMW8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC124283.5-201ENST00000624661 1809 ntBASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
BIVM-ERCC5R4GMW8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
BIVM-ERCC5R4GMW8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
BIVM-ERCC5R4GMW8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC34.25■■■■□ 3.07
BIVM-ERCC5R4GMW8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
BIVM-ERCC5R4GMW8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
BIVM-ERCC5R4GMW8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC34.25■■■■□ 3.07
BIVM-ERCC5R4GMW8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
BIVM-ERCC5R4GMW8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
BIVM-ERCC5R4GMW8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
BIVM-ERCC5R4GMW8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 KRT8P36-201ENST00000489121 1440 ntBASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 PTBP1P-201ENST00000554374 1601 ntBASIC34.22■■■■□ 3.07
BIVM-ERCC5R4GMW8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 KRT16P5-201ENST00000455284 522 ntBASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 KRT18P21-201ENST00000515767 1272 ntBASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC026471.5-201ENST00000615068 467 ntBASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 AC133561.5-201ENST00000635547 218 ntBASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
BIVM-ERCC5R4GMW8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC34.2■■■■□ 3.07
BIVM-ERCC5R4GMW8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC34.2■■■■□ 3.07
BIVM-ERCC5R4GMW8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC34.2■■■■□ 3.07
BIVM-ERCC5R4GMW8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
BIVM-ERCC5R4GMW8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC34.2■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms