Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 KRT18P29-201ENST00000397031 1267 ntBASIC21.13■□□□□ 0.97
RAD54BQ9Y620 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 AC007322.3-201ENST00000426526 701 ntBASIC21.13■□□□□ 0.97
RAD54BQ9Y620 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD54BQ9Y620 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 CDV3P1-201ENST00000471403 739 ntBASIC21.12■□□□□ 0.97
RAD54BQ9Y620 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 ITM2C-210ENST00000620962 501 ntBASIC21.12■□□□□ 0.97
RAD54BQ9Y620 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 FEM1AP1-201ENST00000431297 1995 ntBASIC21.12■□□□□ 0.97
RAD54BQ9Y620 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD54BQ9Y620 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.11■□□□□ 0.97
RAD54BQ9Y620 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAD54BQ9Y620 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 LSM12P1-201ENST00000411836 588 ntBASIC21.1■□□□□ 0.97
RAD54BQ9Y620 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RAD54BQ9Y620 KRT17P1-201ENST00000399211 1546 ntBASIC21.09■□□□□ 0.97
RAD54BQ9Y620 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 GABARAPL3-202ENST00000624044 1851 ntBASIC21.09■□□□□ 0.97
RAD54BQ9Y620 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 PRORSD1P-201ENST00000295112 541 ntBASIC21.09■□□□□ 0.97
RAD54BQ9Y620 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 LINC01521-201ENST00000504184 1943 ntBASIC21.09■□□□□ 0.97
RAD54BQ9Y620 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD54BQ9Y620 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms