Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHGC4Q9Y5F7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGC4Q9Y5F7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 KRT8P36-201ENST00000489121 1440 ntBASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 MIR4758-201ENST00000577688 71 ntBASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 AC105020.6-201ENST00000621523 1217 ntBASIC20.57■□□□□ 0.88
PCDHGC4Q9Y5F7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 AC092118.2-201ENST00000613495 667 ntBASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC4Q9Y5F7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDHGC4Q9Y5F7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 DUSP5P2-201ENST00000426873 1033 ntBASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGC4Q9Y5F7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 AC069152.1-201ENST00000438030 544 ntBASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 AC133041.1-202ENST00000642053 222 ntBASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGC4Q9Y5F7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms