Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 AC097381.1-201ENST00000429019 1296 ntBASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 AC034268.1-201ENST00000441047 882 ntBASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIF3AQ9Y2N7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIF3AQ9Y2N7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 CDV3P1-201ENST00000471403 739 ntBASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 NTF6G-201ENST00000591094 616 ntBASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIF3AQ9Y2N7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 KRT8P36-201ENST00000489121 1440 ntBASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 MIR6821-201ENST00000617625 74 ntBASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIF3AQ9Y2N7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HIF3AQ9Y2N7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.33■□□□□ 0.53
HIF3AQ9Y2N7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HIF3AQ9Y2N7 AC099778.1-201ENST00000568593 1911 ntBASIC18.33■□□□□ 0.53
HIF3AQ9Y2N7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HIF3AQ9Y2N7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.33■□□□□ 0.53
HIF3AQ9Y2N7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HIF3AQ9Y2N7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIF3AQ9Y2N7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIF3AQ9Y2N7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIF3AQ9Y2N7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.33■□□□□ 0.52
HIF3AQ9Y2N7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms