Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 AC027702.1-201ENST00000563810 1770 ntBASIC19.11■□□□□ 0.65
RNF6Q9Y252 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 UBE2DNL-204ENST00000602536 740 ntBASIC19.11■□□□□ 0.65
RNF6Q9Y252 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 AC231657.2-201ENST00000624556 255 ntBASIC19.11■□□□□ 0.65
RNF6Q9Y252 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF6Q9Y252 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF6Q9Y252 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 ABHD17AP1-201ENST00000358206 933 ntBASIC19.1■□□□□ 0.65
RNF6Q9Y252 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 AL034346.1-201ENST00000568244 1277 ntBASIC19.1■□□□□ 0.65
RNF6Q9Y252 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 AL121832.2-201ENST00000610979 668 ntBASIC19.1■□□□□ 0.65
RNF6Q9Y252 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF6Q9Y252 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF6Q9Y252 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF6Q9Y252 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF6Q9Y252 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF6Q9Y252 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF6Q9Y252 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 AC007322.1-201ENST00000426983 750 ntBASIC19.09■□□□□ 0.65
RNF6Q9Y252 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 DUX4L16-201ENST00000555130 1264 ntBASIC19.09■□□□□ 0.65
RNF6Q9Y252 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 AL050303.2-201ENST00000619798 666 ntBASIC19.09■□□□□ 0.65
RNF6Q9Y252 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF6Q9Y252 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF6Q9Y252 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF6Q9Y252 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RNF6Q9Y252 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF6Q9Y252 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF6Q9Y252 AC083906.2-201ENST00000511578 360 ntBASIC19.08■□□□□ 0.64
RNF6Q9Y252 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF6Q9Y252 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF6Q9Y252 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF6Q9Y252 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF6Q9Y252 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF6Q9Y252 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF6Q9Y252 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms