Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 MIR939-201ENST00000401314 82 ntBASIC19.2■□□□□ 0.66
USP22Q9UPT9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 AC091305.1-201ENST00000479476 895 ntBASIC19.2■□□□□ 0.66
USP22Q9UPT9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP22Q9UPT9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.2■□□□□ 0.66
USP22Q9UPT9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.19■□□□□ 0.66
USP22Q9UPT9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 SUDS3P1-201ENST00000505831 966 ntBASIC19.19■□□□□ 0.66
USP22Q9UPT9 AC012414.1-201ENST00000556676 535 ntBASIC19.19■□□□□ 0.66
USP22Q9UPT9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 MIR2861-201ENST00000636310 90 ntBASIC19.19■□□□□ 0.66
USP22Q9UPT9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP22Q9UPT9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
USP22Q9UPT9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP22Q9UPT9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.19■□□□□ 0.66
USP22Q9UPT9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.19■□□□□ 0.66
USP22Q9UPT9 RASA4CP-201ENST00000424092 1398 ntBASIC19.19■□□□□ 0.66
USP22Q9UPT9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.18■□□□□ 0.66
USP22Q9UPT9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP22Q9UPT9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.17■□□□□ 0.66
USP22Q9UPT9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.17■□□□□ 0.66
USP22Q9UPT9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.17■□□□□ 0.66
USP22Q9UPT9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.17■□□□□ 0.66
USP22Q9UPT9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.17■□□□□ 0.66
USP22Q9UPT9 AL136967.2-201ENST00000623968 743 ntBASIC19.17■□□□□ 0.66
USP22Q9UPT9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP22Q9UPT9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.17■□□□□ 0.66
USP22Q9UPT9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP22Q9UPT9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP22Q9UPT9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP22Q9UPT9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP22Q9UPT9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP22Q9UPT9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP22Q9UPT9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
USP22Q9UPT9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP22Q9UPT9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.16■□□□□ 0.66
USP22Q9UPT9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP22Q9UPT9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
USP22Q9UPT9 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.16■□□□□ 0.66
USP22Q9UPT9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.16■□□□□ 0.66
USP22Q9UPT9 AC008175.2-201ENST00000612840 297 ntBASIC19.16■□□□□ 0.66
USP22Q9UPT9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.16■□□□□ 0.66
USP22Q9UPT9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP22Q9UPT9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms