Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.89■■□□□ 1.1
UBQLN1Q9UMX0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBQLN1Q9UMX0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBQLN1Q9UMX0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.89■■□□□ 1.1
UBQLN1Q9UMX0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 TMEM191A-211ENST00000637163 1067 ntBASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 AC005229.4-201ENST00000610085 2198 ntBASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBQLN1Q9UMX0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 AC026366.1-201ENST00000488803 879 ntBASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 AP003097.1-201ENST00000530657 1135 ntBASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.88■■□□□ 1.09
UBQLN1Q9UMX0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 PKD1P6-201ENST00000343738 4769 ntBASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBQLN1Q9UMX0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 ITM2C-210ENST00000620962 501 ntBASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBQLN1Q9UMX0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
UBQLN1Q9UMX0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBQLN1Q9UMX0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBQLN1Q9UMX0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBQLN1Q9UMX0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.84■■□□□ 1.09
UBQLN1Q9UMX0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBQLN1Q9UMX0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms