Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 AC007322.4-201ENST00000509611 723 ntBASIC17.52■□□□□ 0.4
TREM2Q9NZC2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 AC069236.1-201ENST00000604339 616 ntBASIC17.52■□□□□ 0.4
TREM2Q9NZC2 AC243732.1-201ENST00000612648 864 ntBASIC17.52■□□□□ 0.4
TREM2Q9NZC2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.52■□□□□ 0.39
TREM2Q9NZC2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TREM2Q9NZC2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.52■□□□□ 0.39
TREM2Q9NZC2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TREM2Q9NZC2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
TREM2Q9NZC2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TREM2Q9NZC2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TREM2Q9NZC2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 CD99P1-205ENST00000527459 561 ntBASIC17.51■□□□□ 0.39
TREM2Q9NZC2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.51■□□□□ 0.39
TREM2Q9NZC2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.5■□□□□ 0.39
TREM2Q9NZC2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 LINC01521-201ENST00000504184 1943 ntBASIC17.49■□□□□ 0.39
TREM2Q9NZC2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREM2Q9NZC2 AC006128.1-201ENST00000624704 1661 ntBASIC17.48■□□□□ 0.39
TREM2Q9NZC2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TREM2Q9NZC2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.48■□□□□ 0.39
TREM2Q9NZC2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms