Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX43Q9NXZ2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 AC005229.4-201ENST00000610085 2198 ntBASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 MIR2861-201ENST00000636310 90 ntBASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX43Q9NXZ2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 C2orf69P4-201ENST00000565394 541 ntBASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
DDX43Q9NXZ2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 AC060766.5-201ENST00000590539 871 ntBASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX43Q9NXZ2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 FAM201B-201ENST00000458407 597 ntBASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 HLA-B-256ENST00000639848 1089 ntBASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX43Q9NXZ2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX43Q9NXZ2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms