Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MCRIP2P1-201ENST00000394346 511 ntBASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 AL512625.2-201ENST00000417533 625 ntBASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CUEDC1Q9NWM3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 GUSBP6-202ENST00000438529 1198 ntBASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 TSPY6P-201ENST00000448518 926 ntBASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 AC100791.3-201ENST00000617619 330 ntBASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 AC087633.2-202ENST00000565166 1439 ntBASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 MKRN4P-201ENST00000444706 1521 ntBASIC19.66■□□□□ 0.74
CUEDC1Q9NWM3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 CYP2T3P-201ENST00000601990 817 ntBASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CUEDC1Q9NWM3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CUEDC1Q9NWM3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CUEDC1Q9NWM3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.64■□□□□ 0.74
CUEDC1Q9NWM3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CUEDC1Q9NWM3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
CUEDC1Q9NWM3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CUEDC1Q9NWM3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 KRT17P1-201ENST00000399211 1546 ntBASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CUEDC1Q9NWM3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 AL157384.1-201ENST00000445995 2473 ntBASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms