Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 AC105020.6-201ENST00000621523 1217 ntBASIC21.75■■□□□ 1.07
CISHQ9NSE2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
CISHQ9NSE2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
CISHQ9NSE2 AP005212.1-201ENST00000581547 1997 ntBASIC21.74■■□□□ 1.07
CISHQ9NSE2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 BX276092.2-201ENST00000417668 665 ntBASIC21.74■■□□□ 1.07
CISHQ9NSE2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.74■■□□□ 1.07
CISHQ9NSE2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CISHQ9NSE2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CISHQ9NSE2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.74■■□□□ 1.07
CISHQ9NSE2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 MIPEPP3-201ENST00000412105 444 ntBASIC21.73■■□□□ 1.07
CISHQ9NSE2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.73■■□□□ 1.07
CISHQ9NSE2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CISHQ9NSE2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.72■■□□□ 1.07
CISHQ9NSE2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CISHQ9NSE2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 SLC29A4P1-201ENST00000398760 971 ntBASIC21.72■■□□□ 1.07
CISHQ9NSE2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.72■■□□□ 1.07
CISHQ9NSE2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 AL589743.5-201ENST00000616611 1050 ntBASIC21.72■■□□□ 1.07
CISHQ9NSE2 AL109923.1-201ENST00000618799 583 ntBASIC21.72■■□□□ 1.07
CISHQ9NSE2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CISHQ9NSE2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.72■■□□□ 1.07
CISHQ9NSE2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CISHQ9NSE2 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
CISHQ9NSE2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.72■■□□□ 1.07
CISHQ9NSE2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CISHQ9NSE2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 AC092667.1-201ENST00000434301 2586 ntBASIC21.71■■□□□ 1.07
CISHQ9NSE2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 AC020907.5-201ENST00000624372 1936 ntBASIC21.71■■□□□ 1.07
CISHQ9NSE2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 AC104771.1-201ENST00000603335 964 ntBASIC21.71■■□□□ 1.07
CISHQ9NSE2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.71■■□□□ 1.07
CISHQ9NSE2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms