Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.89■□□□□ 0.61
POLE3Q9NRF9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLE3Q9NRF9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 PGM5P4-201ENST00000421970 445 ntBASIC18.88■□□□□ 0.61
POLE3Q9NRF9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
POLE3Q9NRF9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 AC016769.1-201ENST00000409132 1010 ntBASIC18.87■□□□□ 0.61
POLE3Q9NRF9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLE3Q9NRF9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 MIR5787-201ENST00000611784 55 ntBASIC18.86■□□□□ 0.61
POLE3Q9NRF9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
POLE3Q9NRF9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 KRT8P36-201ENST00000489121 1440 ntBASIC18.85■□□□□ 0.61
POLE3Q9NRF9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLE3Q9NRF9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms