Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 SLC29A4P1-201ENST00000398760 971 ntBASIC17.36■□□□□ 0.37
GCM1Q9NP62 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 GUSBP6-202ENST00000438529 1198 ntBASIC17.36■□□□□ 0.37
GCM1Q9NP62 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 AL137060.1-201ENST00000618151 2648 ntBASIC17.35■□□□□ 0.37
GCM1Q9NP62 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.35■□□□□ 0.37
GCM1Q9NP62 PLK5-205ENST00000642079 1969 ntBASIC17.35■□□□□ 0.37
GCM1Q9NP62 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCM1Q9NP62 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.34■□□□□ 0.37
GCM1Q9NP62 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.34■□□□□ 0.37
GCM1Q9NP62 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GCM1Q9NP62 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.34■□□□□ 0.37
GCM1Q9NP62 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.34■□□□□ 0.37
GCM1Q9NP62 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
GCM1Q9NP62 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCM1Q9NP62 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GCM1Q9NP62 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.33■□□□□ 0.37
GCM1Q9NP62 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.33■□□□□ 0.37
GCM1Q9NP62 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
GCM1Q9NP62 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
GCM1Q9NP62 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GCM1Q9NP62 CYP21A1P-202ENST00000354927 1481 ntBASIC17.33■□□□□ 0.37
GCM1Q9NP62 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 MCRIP2P1-201ENST00000394346 511 ntBASIC17.33■□□□□ 0.36
GCM1Q9NP62 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
GCM1Q9NP62 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GCM1Q9NP62 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms