Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 ABHD17AP1-201ENST00000358206 933 ntBASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 PNMA6B-201ENST00000538162 1200 ntBASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G1Q9HCP0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 TSPY20P-201ENST00000450910 630 ntBASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 AC092368.3-202ENST00000574180 1591 ntBASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G1Q9HCP0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CSNK1G1Q9HCP0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1G1Q9HCP0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.33■■□□□ 1
CSNK1G1Q9HCP0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.33■■□□□ 1
CSNK1G1Q9HCP0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CSNK1G1Q9HCP0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 POU5F1P3-201ENST00000428824 1078 ntBASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.32■■□□□ 1
CSNK1G1Q9HCP0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms