Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 AL353708.3-201ENST00000610272 989 ntBASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H2Q9HBD1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H2Q9HBD1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 AC026471.5-201ENST00000615068 467 ntBASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 AL121829.2-201ENST00000620908 328 ntBASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H2Q9HBD1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H2Q9HBD1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H2Q9HBD1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.83■■□□□ 1.09
RC3H2Q9HBD1 AP003071.4-201ENST00000562276 1284 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms