Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
ZNF408Q9H9D4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF408Q9H9D4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF408Q9H9D4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.1■■□□□ 1.45
ZNF408Q9H9D4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF408Q9H9D4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF408Q9H9D4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 SLC25A3P1-201ENST00000443844 931 ntBASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 AC124283.5-201ENST00000624661 1809 ntBASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF408Q9H9D4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ZNF408Q9H9D4 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.08■■□□□ 1.45
ZNF408Q9H9D4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
ZNF408Q9H9D4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ZNF408Q9H9D4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 AP002982.1-201ENST00000492365 877 ntBASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 WWOX-216ENST00000569818 525 ntBASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 AL121829.2-201ENST00000620908 328 ntBASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 AC073508.3-201ENST00000619697 1419 ntBASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.07■■□□□ 1.44
ZNF408Q9H9D4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 AC010947.1-201ENST00000623454 693 ntBASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF408Q9H9D4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ZNF408Q9H9D4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF408Q9H9D4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
ZNF408Q9H9D4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF408Q9H9D4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.03■■□□□ 1.44
ZNF408Q9H9D4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF408Q9H9D4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF408Q9H9D4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.03■■□□□ 1.44
ZNF408Q9H9D4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms