Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS16Q9H269 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.33■■□□□ 1.17
VPS16Q9H269 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.33■■□□□ 1.17
VPS16Q9H269 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
VPS16Q9H269 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS16Q9H269 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS16Q9H269 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS16Q9H269 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS16Q9H269 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS16Q9H269 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VPS16Q9H269 AC123595.1-201ENST00000440769 1046 ntBASIC22.33■■□□□ 1.17
VPS16Q9H269 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS16Q9H269 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.33■■□□□ 1.17
VPS16Q9H269 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.33■■□□□ 1.17
VPS16Q9H269 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.33■■□□□ 1.17
VPS16Q9H269 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.33■■□□□ 1.17
VPS16Q9H269 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.33■■□□□ 1.17
VPS16Q9H269 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.33■■□□□ 1.17
VPS16Q9H269 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS16Q9H269 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS16Q9H269 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS16Q9H269 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
VPS16Q9H269 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS16Q9H269 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.33■■□□□ 1.16
VPS16Q9H269 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS16Q9H269 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS16Q9H269 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS16Q9H269 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
VPS16Q9H269 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.32■■□□□ 1.16
VPS16Q9H269 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
VPS16Q9H269 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS16Q9H269 CCDC92B-201ENST00000575506 885 ntBASIC22.32■■□□□ 1.16
VPS16Q9H269 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.32■■□□□ 1.16
VPS16Q9H269 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
VPS16Q9H269 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS16Q9H269 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS16Q9H269 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS16Q9H269 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS16Q9H269 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS16Q9H269 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.31■■□□□ 1.16
VPS16Q9H269 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
VPS16Q9H269 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.31■■□□□ 1.16
VPS16Q9H269 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.31■■□□□ 1.16
VPS16Q9H269 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS16Q9H269 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.31■■□□□ 1.16
VPS16Q9H269 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS16Q9H269 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS16Q9H269 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
VPS16Q9H269 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS16Q9H269 AC004854.2-201ENST00000608450 1441 ntBASIC22.31■■□□□ 1.16
VPS16Q9H269 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
VPS16Q9H269 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
VPS16Q9H269 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 AC091799.1-201ENST00000422823 811 ntBASIC22.3■■□□□ 1.16
VPS16Q9H269 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.3■■□□□ 1.16
VPS16Q9H269 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.3■■□□□ 1.16
VPS16Q9H269 KRT18P14-201ENST00000534205 1250 ntBASIC22.3■■□□□ 1.16
VPS16Q9H269 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
VPS16Q9H269 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS16Q9H269 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
VPS16Q9H269 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS16Q9H269 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS16Q9H269 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
VPS16Q9H269 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
VPS16Q9H269 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.29■■□□□ 1.16
VPS16Q9H269 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms