Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH23Q9H251 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.85■■□□□ 1.09
CDH23Q9H251 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH23Q9H251 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH23Q9H251 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CDH23Q9H251 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH23Q9H251 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CDH23Q9H251 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH23Q9H251 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.85■■□□□ 1.09
CDH23Q9H251 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH23Q9H251 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDH23Q9H251 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH23Q9H251 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.84■■□□□ 1.09
CDH23Q9H251 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CDH23Q9H251 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH23Q9H251 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH23Q9H251 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.84■■□□□ 1.09
CDH23Q9H251 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDH23Q9H251 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH23Q9H251 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH23Q9H251 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH23Q9H251 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.83■■□□□ 1.09
CDH23Q9H251 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH23Q9H251 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH23Q9H251 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CDH23Q9H251 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH23Q9H251 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
CDH23Q9H251 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH23Q9H251 AC091076.1-201ENST00000610741 619 ntBASIC21.83■■□□□ 1.09
CDH23Q9H251 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.83■■□□□ 1.09
CDH23Q9H251 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH23Q9H251 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH23Q9H251 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH23Q9H251 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH23Q9H251 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CDH23Q9H251 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH23Q9H251 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH23Q9H251 MIR1238-201ENST00000408483 83 ntBASIC21.83■■□□□ 1.08
CDH23Q9H251 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH23Q9H251 HTR7P1-201ENST00000538670 1336 ntBASIC21.83■■□□□ 1.08
CDH23Q9H251 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.83■■□□□ 1.08
CDH23Q9H251 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH23Q9H251 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH23Q9H251 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH23Q9H251 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.82■■□□□ 1.08
CDH23Q9H251 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.82■■□□□ 1.08
CDH23Q9H251 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH23Q9H251 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CDH23Q9H251 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH23Q9H251 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CDH23Q9H251 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH23Q9H251 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.82■■□□□ 1.08
CDH23Q9H251 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH23Q9H251 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH23Q9H251 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH23Q9H251 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH23Q9H251 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH23Q9H251 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CDH23Q9H251 KRT18P48-201ENST00000434763 852 ntBASIC21.82■■□□□ 1.08
CDH23Q9H251 C1orf229-201ENST00000623686 2258 ntBASIC21.81■■□□□ 1.08
CDH23Q9H251 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH23Q9H251 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH23Q9H251 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH23Q9H251 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH23Q9H251 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH23Q9H251 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH23Q9H251 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CDH23Q9H251 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH23Q9H251 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH23Q9H251 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH23Q9H251 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH23Q9H251 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.81■■□□□ 1.08
CDH23Q9H251 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.81■■□□□ 1.08
CDH23Q9H251 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH23Q9H251 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDH23Q9H251 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH23Q9H251 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.8■■□□□ 1.08
CDH23Q9H251 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDH23Q9H251 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH23Q9H251 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH23Q9H251 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH23Q9H251 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH23Q9H251 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH23Q9H251 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDH23Q9H251 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH23Q9H251 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH23Q9H251 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CDH23Q9H251 AC022616.7-201ENST00000525383 220 ntBASIC21.79■■□□□ 1.08
CDH23Q9H251 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
CDH23Q9H251 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.79■■□□□ 1.08
CDH23Q9H251 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH23Q9H251 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH23Q9H251 AC010203.1-204ENST00000548782 407 ntBASIC21.79■■□□□ 1.08
CDH23Q9H251 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.79■■□□□ 1.08
CDH23Q9H251 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH23Q9H251 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH23Q9H251 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH23Q9H251 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH23Q9H251 KRT16P5-201ENST00000455284 522 ntBASIC21.79■■□□□ 1.08
CDH23Q9H251 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms