Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 AL391422.3-201ENST00000603791 2761 ntBASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NUCKS1Q9H1E3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 AP001160.3-201ENST00000601484 763 ntBASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.03■■□□□ 1.12
NUCKS1Q9H1E3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 AC104187.1-201ENST00000607510 612 ntBASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 AC243732.1-201ENST00000612648 864 ntBASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NUCKS1Q9H1E3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.02■■□□□ 1.11
NUCKS1Q9H1E3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NUCKS1Q9H1E3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.11
NUCKS1Q9H1E3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.01■■□□□ 1.11
NUCKS1Q9H1E3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 KRT19P1-201ENST00000405746 1186 ntBASIC22■■□□□ 1.11
NUCKS1Q9H1E3 SLC7A5P2-201ENST00000553010 536 ntBASIC22■■□□□ 1.11
NUCKS1Q9H1E3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22■■□□□ 1.11
NUCKS1Q9H1E3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms