Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MCRIP2P1-201ENST00000394346 511 ntBASIC18.09■□□□□ 0.49
USB1Q9BQ65 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.09■□□□□ 0.49
USB1Q9BQ65 AC093787.1-201ENST00000450396 207 ntBASIC18.09■□□□□ 0.49
USB1Q9BQ65 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.09■□□□□ 0.49
USB1Q9BQ65 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.09■□□□□ 0.49
USB1Q9BQ65 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.09■□□□□ 0.49
USB1Q9BQ65 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.09■□□□□ 0.49
USB1Q9BQ65 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
USB1Q9BQ65 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USB1Q9BQ65 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USB1Q9BQ65 AC116050.2-201ENST00000612102 1779 ntBASIC18.09■□□□□ 0.49
USB1Q9BQ65 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USB1Q9BQ65 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USB1Q9BQ65 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USB1Q9BQ65 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USB1Q9BQ65 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USB1Q9BQ65 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USB1Q9BQ65 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USB1Q9BQ65 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.08■□□□□ 0.49
USB1Q9BQ65 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USB1Q9BQ65 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.08■□□□□ 0.48
USB1Q9BQ65 LSM12P1-201ENST00000411836 588 ntBASIC18.08■□□□□ 0.48
USB1Q9BQ65 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.08■□□□□ 0.48
USB1Q9BQ65 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.08■□□□□ 0.48
USB1Q9BQ65 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USB1Q9BQ65 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
USB1Q9BQ65 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USB1Q9BQ65 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USB1Q9BQ65 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
USB1Q9BQ65 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USB1Q9BQ65 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USB1Q9BQ65 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USB1Q9BQ65 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
USB1Q9BQ65 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.08■□□□□ 0.48
USB1Q9BQ65 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.07■□□□□ 0.48
USB1Q9BQ65 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.07■□□□□ 0.48
USB1Q9BQ65 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.07■□□□□ 0.48
USB1Q9BQ65 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.07■□□□□ 0.48
USB1Q9BQ65 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.07■□□□□ 0.48
USB1Q9BQ65 PGM5P4-201ENST00000421970 445 ntBASIC18.07■□□□□ 0.48
USB1Q9BQ65 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
USB1Q9BQ65 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.07■□□□□ 0.48
USB1Q9BQ65 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.07■□□□□ 0.48
USB1Q9BQ65 AL589743.5-201ENST00000616611 1050 ntBASIC18.07■□□□□ 0.48
USB1Q9BQ65 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USB1Q9BQ65 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 NIFKP4-201ENST00000567275 1192 ntBASIC18.06■□□□□ 0.48
USB1Q9BQ65 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
USB1Q9BQ65 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USB1Q9BQ65 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USB1Q9BQ65 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USB1Q9BQ65 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USB1Q9BQ65 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USB1Q9BQ65 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.05■□□□□ 0.48
USB1Q9BQ65 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USB1Q9BQ65 CYP2T3P-201ENST00000601990 817 ntBASIC18.05■□□□□ 0.48
USB1Q9BQ65 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USB1Q9BQ65 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms