Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.89■□□□□ 0.45
VRK1Q99986 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VRK1Q99986 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 AC061975.6-201ENST00000579045 1553 ntBASIC17.88■□□□□ 0.45
VRK1Q99986 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VRK1Q99986 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.88■□□□□ 0.45
VRK1Q99986 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.88■□□□□ 0.45
VRK1Q99986 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.88■□□□□ 0.45
VRK1Q99986 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.88■□□□□ 0.45
VRK1Q99986 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VRK1Q99986 KRT16P2-201ENST00000414673 1423 ntBASIC17.88■□□□□ 0.45
VRK1Q99986 AC026471.6-201ENST00000622954 1905 ntBASIC17.88■□□□□ 0.45
VRK1Q99986 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
VRK1Q99986 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK1Q99986 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK1Q99986 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.87■□□□□ 0.45
VRK1Q99986 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.87■□□□□ 0.45
VRK1Q99986 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK1Q99986 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.87■□□□□ 0.45
VRK1Q99986 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VRK1Q99986 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.87■□□□□ 0.45
VRK1Q99986 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VRK1Q99986 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.87■□□□□ 0.45
VRK1Q99986 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VRK1Q99986 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.86■□□□□ 0.45
VRK1Q99986 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VRK1Q99986 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VRK1Q99986 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.86■□□□□ 0.45
VRK1Q99986 AC068338.2-201ENST00000563278 1430 ntBASIC17.86■□□□□ 0.45
VRK1Q99986 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.86■□□□□ 0.45
VRK1Q99986 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VRK1Q99986 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK1Q99986 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
VRK1Q99986 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK1Q99986 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.85■□□□□ 0.45
VRK1Q99986 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK1Q99986 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VRK1Q99986 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VRK1Q99986 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK1Q99986 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK1Q99986 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK1Q99986 CYP2T1P-201ENST00000432607 1285 ntBASIC17.85■□□□□ 0.45
VRK1Q99986 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.85■□□□□ 0.45
VRK1Q99986 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.85■□□□□ 0.45
VRK1Q99986 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.85■□□□□ 0.45
VRK1Q99986 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VRK1Q99986 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK1Q99986 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.85■□□□□ 0.45
VRK1Q99986 AC133552.2-202ENST00000575694 574 ntBASIC17.85■□□□□ 0.45
VRK1Q99986 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.85■□□□□ 0.45
VRK1Q99986 AC069236.1-201ENST00000604339 616 ntBASIC17.85■□□□□ 0.45
VRK1Q99986 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.85■□□□□ 0.45
VRK1Q99986 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VRK1Q99986 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.84■□□□□ 0.45
VRK1Q99986 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms