Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.88■□□□□ 0.77
NPAS2Q99743 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS2Q99743 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NPAS2Q99743 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS2Q99743 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS2Q99743 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS2Q99743 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NPAS2Q99743 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 AC087289.5-201ENST00000586076 3175 ntBASIC19.87■□□□□ 0.77
NPAS2Q99743 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 AC055733.4-201ENST00000638462 1354 ntBASIC19.87■□□□□ 0.77
NPAS2Q99743 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPAS2Q99743 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS2Q99743 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS2Q99743 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS2Q99743 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS2Q99743 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.87■□□□□ 0.77
NPAS2Q99743 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS2Q99743 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS2Q99743 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS2Q99743 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS2Q99743 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPAS2Q99743 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPAS2Q99743 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS2Q99743 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
NPAS2Q99743 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NPAS2Q99743 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS2Q99743 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NPAS2Q99743 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS2Q99743 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS2Q99743 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS2Q99743 AC137761.2-201ENST00000561729 223 ntBASIC19.86■□□□□ 0.77
NPAS2Q99743 AC145350.3-201ENST00000569033 163 ntBASIC19.86■□□□□ 0.77
NPAS2Q99743 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS2Q99743 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS2Q99743 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS2Q99743 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NPAS2Q99743 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.85■□□□□ 0.77
NPAS2Q99743 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.85■□□□□ 0.77
NPAS2Q99743 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.85■□□□□ 0.77
NPAS2Q99743 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
NPAS2Q99743 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.85■□□□□ 0.77
NPAS2Q99743 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.85■□□□□ 0.77
NPAS2Q99743 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.85■□□□□ 0.77
NPAS2Q99743 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.85■□□□□ 0.77
NPAS2Q99743 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS2Q99743 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
NPAS2Q99743 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.84■□□□□ 0.77
NPAS2Q99743 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.84■□□□□ 0.77
NPAS2Q99743 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.84■□□□□ 0.77
NPAS2Q99743 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NPAS2Q99743 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS2Q99743 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS2Q99743 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS2Q99743 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NPAS2Q99743 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS2Q99743 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS2Q99743 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS2Q99743 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.83■□□□□ 0.77
NPAS2Q99743 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS2Q99743 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms