Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDK5RAP1Q96SZ6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 PLK5-205ENST00000642079 1969 ntBASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 AC006128.1-201ENST00000624704 1661 ntBASIC21.15■□□□□ 0.98
CDK5RAP1Q96SZ6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDK5RAP1Q96SZ6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDK5RAP1Q96SZ6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.14■□□□□ 0.98
CDK5RAP1Q96SZ6 AF106564.1-201ENST00000607058 2553 ntBASIC21.14■□□□□ 0.98
CDK5RAP1Q96SZ6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 ESRRAP1-201ENST00000400596 1257 ntBASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 AC026366.1-201ENST00000488803 879 ntBASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 AP003097.1-201ENST00000530657 1135 ntBASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP1Q96SZ6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 TMEM191A-211ENST00000637163 1067 ntBASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms