Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 MIR574-201ENST00000385209 96 ntBASIC6.3□□□□□ -1.4
HMCN1Q96RW7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 BX640515.1-201ENST00000617215 977 ntBASIC6.3□□□□□ -1.4
HMCN1Q96RW7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 RNA5SP419-201ENST00000515908 135 ntBASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 IL9RP2-201ENST00000423948 1312 ntBASIC6.29□□□□□ -1.4
HMCN1Q96RW7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AL662844.1-201ENST00000546340 181 ntBASIC6.29□□□□□ -1.4
HMCN1Q96RW7 C2orf69P3-201ENST00000565542 1120 ntBASIC6.29□□□□□ -1.4
HMCN1Q96RW7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AL031008.1-201ENST00000619963 541 ntBASIC6.29□□□□□ -1.4
HMCN1Q96RW7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SLC25A1P2-201ENST00000430693 912 ntBASIC6.29□□□□□ -1.4
HMCN1Q96RW7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC6.29□□□□□ -1.4
HMCN1Q96RW7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC6.28□□□□□ -1.4
HMCN1Q96RW7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms