Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUDCD1Q96RS6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUDCD1Q96RS6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 AL591742.1-201ENST00000604433 565 ntBASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUDCD1Q96RS6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 AC026185.1-201ENST00000445748 174 ntBASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 AL162412.1-201ENST00000567129 965 ntBASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUDCD1Q96RS6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 AC068338.2-201ENST00000563278 1430 ntBASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.96■□□□□ 0.95
NUDCD1Q96RS6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 AC116050.2-201ENST00000612102 1779 ntBASIC20.95■□□□□ 0.94
NUDCD1Q96RS6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 CDV3P1-201ENST00000471403 739 ntBASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD1Q96RS6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms