Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.17■□□□□ 0.66
NR1H4Q96RI1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NR1H4Q96RI1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H4Q96RI1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 Z82202.1-201ENST00000623446 1880 ntBASIC19.15■□□□□ 0.66
NR1H4Q96RI1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H4Q96RI1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.14■□□□□ 0.66
NR1H4Q96RI1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.14■□□□□ 0.66
NR1H4Q96RI1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 AL032819.2-201ENST00000624543 2162 ntBASIC19.14■□□□□ 0.65
NR1H4Q96RI1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H4Q96RI1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 YBX1P4-201ENST00000392794 808 ntBASIC19.13■□□□□ 0.65
NR1H4Q96RI1 MIR4508-201ENST00000584178 70 ntBASIC19.13■□□□□ 0.65
NR1H4Q96RI1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms