Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 KRT19P1-201ENST00000405746 1186 ntBASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN4Q96NZ1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 UBE2DNL-204ENST00000602536 740 ntBASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN4Q96NZ1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 AL512408.1-201ENST00000569378 2000 ntBASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN4Q96NZ1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.5
FOXN4Q96NZ1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXN4Q96NZ1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FOXN4Q96NZ1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN4Q96NZ1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms