Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TSPY15P-201ENST00000457163 923 ntBASIC23.81■■□□□ 1.4
TRIM47Q96LD4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM47Q96LD4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM47Q96LD4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM47Q96LD4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM47Q96LD4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM47Q96LD4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM47Q96LD4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 AC133561.5-201ENST00000635547 218 ntBASIC23.8■■□□□ 1.4
TRIM47Q96LD4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM47Q96LD4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.79■■□□□ 1.4
TRIM47Q96LD4 AC026310.3-201ENST00000625186 2373 ntBASIC23.79■■□□□ 1.4
TRIM47Q96LD4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 AL049637.2-201ENST00000641778 930 ntBASIC23.79■■□□□ 1.4
TRIM47Q96LD4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM47Q96LD4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 AC087499.1-201ENST00000418141 1075 ntBASIC23.78■■□□□ 1.4
TRIM47Q96LD4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TRIM47Q96LD4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 AC244015.2-201ENST00000616358 1861 ntBASIC23.77■■□□□ 1.4
TRIM47Q96LD4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 MTDHP1-201ENST00000605323 784 ntBASIC23.77■■□□□ 1.4
TRIM47Q96LD4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM47Q96LD4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 RCN1P1-201ENST00000400413 996 ntBASIC23.76■■□□□ 1.39
TRIM47Q96LD4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 AC124016.1-201ENST00000609552 612 ntBASIC23.76■■□□□ 1.39
TRIM47Q96LD4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM47Q96LD4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms