Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
COX4I2Q96KJ9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.76■□□□□ 0.59
COX4I2Q96KJ9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 RAP2CP1-201ENST00000605103 478 ntBASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX4I2Q96KJ9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 LTB4R2-202ENST00000528054 3092 ntBASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 AC006015.1-201ENST00000429970 570 ntBASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 OXCT2P1-201ENST00000447263 1535 ntBASIC18.74■□□□□ 0.59
COX4I2Q96KJ9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COX4I2Q96KJ9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms