Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF25Q96BH1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF25Q96BH1 AC112907.3-201ENST00000577781 2400 ntBASIC21.34■■□□□ 1.01
RNF25Q96BH1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF25Q96BH1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF25Q96BH1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF25Q96BH1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF25Q96BH1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF25Q96BH1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF25Q96BH1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF25Q96BH1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RNF25Q96BH1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF25Q96BH1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 RBM17P2-201ENST00000616397 1405 ntBASIC21.33■■□□□ 1.01
RNF25Q96BH1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF25Q96BH1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
RNF25Q96BH1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF25Q96BH1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF25Q96BH1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF25Q96BH1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.33■■□□□ 1
RNF25Q96BH1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
RNF25Q96BH1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF25Q96BH1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RNF25Q96BH1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF25Q96BH1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.32■■□□□ 1
RNF25Q96BH1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RNF25Q96BH1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.32■■□□□ 1
RNF25Q96BH1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
RNF25Q96BH1 KRT19P1-201ENST00000405746 1186 ntBASIC21.32■■□□□ 1
RNF25Q96BH1 AC091799.1-201ENST00000422823 811 ntBASIC21.32■■□□□ 1
RNF25Q96BH1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.32■■□□□ 1
RNF25Q96BH1 AL162377.1-201ENST00000618844 1793 ntBASIC21.32■■□□□ 1
RNF25Q96BH1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF25Q96BH1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
RNF25Q96BH1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.32■■□□□ 1
RNF25Q96BH1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.32■■□□□ 1
RNF25Q96BH1 AC019069.1-201ENST00000610008 1333 ntBASIC21.31■■□□□ 1
RNF25Q96BH1 AC092720.2-201ENST00000602388 1665 ntBASIC21.31■■□□□ 1
RNF25Q96BH1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.31■■□□□ 1
RNF25Q96BH1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF25Q96BH1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF25Q96BH1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.31■■□□□ 1
RNF25Q96BH1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RNF25Q96BH1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RNF25Q96BH1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF25Q96BH1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF25Q96BH1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.31■■□□□ 1
RNF25Q96BH1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF25Q96BH1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF25Q96BH1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF25Q96BH1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.31■■□□□ 1
RNF25Q96BH1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF25Q96BH1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.3■■□□□ 1
RNF25Q96BH1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF25Q96BH1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RNF25Q96BH1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF25Q96BH1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF25Q96BH1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF25Q96BH1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RNF25Q96BH1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF25Q96BH1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF25Q96BH1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.3■■□□□ 1
RNF25Q96BH1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RNF25Q96BH1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.3■■□□□ 1
RNF25Q96BH1 UBE2DNL-204ENST00000602536 740 ntBASIC21.3■■□□□ 1
RNF25Q96BH1 MIR2861-201ENST00000636310 90 ntBASIC21.3■■□□□ 1
RNF25Q96BH1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RNF25Q96BH1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.3■■□□□ 1
RNF25Q96BH1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF25Q96BH1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RNF25Q96BH1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.3■■□□□ 1
RNF25Q96BH1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
RNF25Q96BH1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF25Q96BH1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF25Q96BH1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF25Q96BH1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF25Q96BH1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF25Q96BH1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms