Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.67■□□□□ 0.74
NCLNQ969V3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.67■□□□□ 0.74
NCLNQ969V3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCLNQ969V3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NCLNQ969V3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCLNQ969V3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCLNQ969V3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCLNQ969V3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCLNQ969V3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.66■□□□□ 0.74
NCLNQ969V3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.66■□□□□ 0.74
NCLNQ969V3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.66■□□□□ 0.74
NCLNQ969V3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.66■□□□□ 0.74
NCLNQ969V3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NCLNQ969V3 KRT18P11-201ENST00000435214 1283 ntBASIC19.66■□□□□ 0.74
NCLNQ969V3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.66■□□□□ 0.74
NCLNQ969V3 UBE2DNL-204ENST00000602536 740 ntBASIC19.66■□□□□ 0.74
NCLNQ969V3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
NCLNQ969V3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCLNQ969V3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NCLNQ969V3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.66■□□□□ 0.74
NCLNQ969V3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.65■□□□□ 0.74
NCLNQ969V3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NCLNQ969V3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.65■□□□□ 0.74
NCLNQ969V3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.65■□□□□ 0.74
NCLNQ969V3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.65■□□□□ 0.74
NCLNQ969V3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NCLNQ969V3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NCLNQ969V3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NCLNQ969V3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCLNQ969V3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NCLNQ969V3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCLNQ969V3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCLNQ969V3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.64■□□□□ 0.74
NCLNQ969V3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NCLNQ969V3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLNQ969V3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.64■□□□□ 0.73
NCLNQ969V3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.64■□□□□ 0.73
NCLNQ969V3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.64■□□□□ 0.73
NCLNQ969V3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLNQ969V3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.64■□□□□ 0.73
NCLNQ969V3 AC008175.2-201ENST00000612840 297 ntBASIC19.64■□□□□ 0.73
NCLNQ969V3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.64■□□□□ 0.73
NCLNQ969V3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NCLNQ969V3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLNQ969V3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLNQ969V3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLNQ969V3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.63■□□□□ 0.73
NCLNQ969V3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.63■□□□□ 0.73
NCLNQ969V3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.63■□□□□ 0.73
NCLNQ969V3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NCLNQ969V3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
NCLNQ969V3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.63■□□□□ 0.73
NCLNQ969V3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NCLNQ969V3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NCLNQ969V3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLNQ969V3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms