Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP7Q93009 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP7Q93009 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP7Q93009 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
USP7Q93009 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
USP7Q93009 FEM1AP1-201ENST00000431297 1995 ntBASIC20.08■□□□□ 0.8
USP7Q93009 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
USP7Q93009 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
USP7Q93009 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
USP7Q93009 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.07■□□□□ 0.8
USP7Q93009 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP7Q93009 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.07■□□□□ 0.8
USP7Q93009 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP7Q93009 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.07■□□□□ 0.8
USP7Q93009 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.07■□□□□ 0.8
USP7Q93009 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.07■□□□□ 0.8
USP7Q93009 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
USP7Q93009 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.07■□□□□ 0.8
USP7Q93009 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.07■□□□□ 0.8
USP7Q93009 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
USP7Q93009 AC121338.2-201ENST00000622535 1744 ntBASIC20.07■□□□□ 0.8
USP7Q93009 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP7Q93009 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP7Q93009 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP7Q93009 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP7Q93009 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP7Q93009 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP7Q93009 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP7Q93009 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP7Q93009 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP7Q93009 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP7Q93009 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP7Q93009 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.06■□□□□ 0.8
USP7Q93009 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
USP7Q93009 AC061975.6-201ENST00000579045 1553 ntBASIC20.06■□□□□ 0.8
USP7Q93009 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
USP7Q93009 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.06■□□□□ 0.8
USP7Q93009 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP7Q93009 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.06■□□□□ 0.8
USP7Q93009 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP7Q93009 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP7Q93009 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.05■□□□□ 0.8
USP7Q93009 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
USP7Q93009 PRORSD1P-201ENST00000295112 541 ntBASIC20.05■□□□□ 0.8
USP7Q93009 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 AC097658.1-201ENST00000475555 843 ntBASIC20.05■□□□□ 0.8
USP7Q93009 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP7Q93009 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.05■□□□□ 0.8
USP7Q93009 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.05■□□□□ 0.8
USP7Q93009 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.05■□□□□ 0.8
USP7Q93009 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP7Q93009 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.05■□□□□ 0.8
USP7Q93009 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
USP7Q93009 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP7Q93009 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.05■□□□□ 0.8
USP7Q93009 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP7Q93009 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.04■□□□□ 0.8
USP7Q93009 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.04■□□□□ 0.8
USP7Q93009 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP7Q93009 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.04■□□□□ 0.8
USP7Q93009 RBM17P2-201ENST00000616397 1405 ntBASIC20.04■□□□□ 0.8
USP7Q93009 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP7Q93009 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP7Q93009 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP7Q93009 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP7Q93009 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.04■□□□□ 0.8
USP7Q93009 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.04■□□□□ 0.8
USP7Q93009 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.04■□□□□ 0.8
USP7Q93009 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.04■□□□□ 0.8
USP7Q93009 RARRES2P4-201ENST00000514074 484 ntBASIC20.04■□□□□ 0.8
USP7Q93009 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.04■□□□□ 0.8
USP7Q93009 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP7Q93009 AL591742.1-201ENST00000604433 565 ntBASIC20.04■□□□□ 0.8
USP7Q93009 AC083880.1-201ENST00000608266 535 ntBASIC20.04■□□□□ 0.8
USP7Q93009 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.04■□□□□ 0.8
USP7Q93009 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP7Q93009 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP7Q93009 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 KRT16P2-201ENST00000414673 1423 ntBASIC20.03■□□□□ 0.8
USP7Q93009 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms