Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCNB3Q8WWL7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCNB3Q8WWL7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCNB3Q8WWL7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCNB3Q8WWL7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 PGM5P4-201ENST00000421970 445 ntBASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 AF106564.1-201ENST00000607058 2553 ntBASIC31.52■■■□□ 2.64
CCNB3Q8WWL7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 MTDHP1-201ENST00000605323 784 ntBASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 AL356652.1-201ENST00000615962 565 ntBASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.51■■■□□ 2.63
CCNB3Q8WWL7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC31.5■■■□□ 2.63
CCNB3Q8WWL7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCNB3Q8WWL7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCNB3Q8WWL7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC31.5■■■□□ 2.63
CCNB3Q8WWL7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
CCNB3Q8WWL7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC31.5■■■□□ 2.63
CCNB3Q8WWL7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
CCNB3Q8WWL7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCNB3Q8WWL7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCNB3Q8WWL7 SNORA78-201ENST00000459373 127 ntBASIC31.49■■■□□ 2.63
CCNB3Q8WWL7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCNB3Q8WWL7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCNB3Q8WWL7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC31.49■■■□□ 2.63
CCNB3Q8WWL7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCNB3Q8WWL7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 AC005829.2-201ENST00000571422 1056 ntBASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNB3Q8WWL7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC31.47■■■□□ 2.63
CCNB3Q8WWL7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
CCNB3Q8WWL7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CCNB3Q8WWL7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CCNB3Q8WWL7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.45■■■□□ 2.63
CCNB3Q8WWL7 AC124016.1-201ENST00000609552 612 ntBASIC31.45■■■□□ 2.63
CCNB3Q8WWL7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC31.45■■■□□ 2.63
CCNB3Q8WWL7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CCNB3Q8WWL7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CCNB3Q8WWL7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCNB3Q8WWL7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.45■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms