Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 KRT18P11-201ENST00000435214 1283 ntBASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 AC137761.2-201ENST00000561729 223 ntBASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 AC145350.3-201ENST00000569033 163 ntBASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 AL121603.2-201ENST00000557373 2117 ntBASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 AC092720.2-201ENST00000602388 1665 ntBASIC21.18■□□□□ 0.98
TRAF3IP1Q8TDR0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 RARRES2P6-201ENST00000567333 442 ntBASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 MIR2861-201ENST00000636310 90 ntBASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP1Q8TDR0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 KRT18P5-201ENST00000436075 1291 ntBASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAF3IP1Q8TDR0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 AC016769.1-201ENST00000409132 1010 ntBASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 FAM21FP-204ENST00000608637 956 ntBASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 AC010536.3-201ENST00000620306 533 ntBASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRAF3IP1Q8TDR0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAF3IP1Q8TDR0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAF3IP1Q8TDR0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRAF3IP1Q8TDR0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
TRAF3IP1Q8TDR0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRAF3IP1Q8TDR0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms