Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD6Q8TD26 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD6Q8TD26 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD6Q8TD26 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.62■□□□□ 0.57
CHD6Q8TD26 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CHD6Q8TD26 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD6Q8TD26 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD6Q8TD26 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.62■□□□□ 0.57
CHD6Q8TD26 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.62■□□□□ 0.57
CHD6Q8TD26 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD6Q8TD26 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD6Q8TD26 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD6Q8TD26 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD6Q8TD26 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD6Q8TD26 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD6Q8TD26 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD6Q8TD26 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD6Q8TD26 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD6Q8TD26 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD6Q8TD26 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD6Q8TD26 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD6Q8TD26 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD6Q8TD26 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD6Q8TD26 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD6Q8TD26 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD6Q8TD26 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD6Q8TD26 AC124283.5-201ENST00000624661 1809 ntBASIC18.6■□□□□ 0.57
CHD6Q8TD26 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD6Q8TD26 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 VENTXP5-201ENST00000523979 775 ntBASIC18.6■□□□□ 0.57
CHD6Q8TD26 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 NPAP1P7-201ENST00000613027 823 ntBASIC18.6■□□□□ 0.57
CHD6Q8TD26 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD6Q8TD26 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD6Q8TD26 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHD6Q8TD26 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.59■□□□□ 0.57
CHD6Q8TD26 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD6Q8TD26 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD6Q8TD26 NIFKP9-201ENST00000419265 221 ntBASIC18.59■□□□□ 0.57
CHD6Q8TD26 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD6Q8TD26 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD6Q8TD26 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD6Q8TD26 LINC01960-201ENST00000563759 1884 ntBASIC18.59■□□□□ 0.57
CHD6Q8TD26 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD6Q8TD26 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD6Q8TD26 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CHD6Q8TD26 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHD6Q8TD26 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD6Q8TD26 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD6Q8TD26 EMBP1-201ENST00000458200 901 ntBASIC18.58■□□□□ 0.57
CHD6Q8TD26 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHD6Q8TD26 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
CHD6Q8TD26 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD6Q8TD26 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD6Q8TD26 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD6Q8TD26 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD6Q8TD26 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.58■□□□□ 0.56
CHD6Q8TD26 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD6Q8TD26 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD6Q8TD26 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD6Q8TD26 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD6Q8TD26 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD6Q8TD26 AL662844.1-201ENST00000546340 181 ntBASIC18.57■□□□□ 0.56
CHD6Q8TD26 AC027796.2-201ENST00000575326 344 ntBASIC18.57■□□□□ 0.56
CHD6Q8TD26 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms