Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 HLA-L-209ENST00000420110 1011 ntBASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH19Q8TAB3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH19Q8TAB3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 AC026185.1-201ENST00000445748 174 ntBASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH19Q8TAB3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 RARRES2P4-201ENST00000514074 484 ntBASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH19Q8TAB3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH19Q8TAB3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH19Q8TAB3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH19Q8TAB3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH19Q8TAB3 AL391422.3-201ENST00000603791 2761 ntBASIC21.02■□□□□ 0.95
PCDH19Q8TAB3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 AC087633.2-202ENST00000565166 1439 ntBASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 SLC25A24-204ENST00000569674 2357 ntBASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH19Q8TAB3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH19Q8TAB3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH19Q8TAB3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH19Q8TAB3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PCDH19Q8TAB3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH19Q8TAB3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PCDH19Q8TAB3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21■□□□□ 0.95
PCDH19Q8TAB3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PCDH19Q8TAB3 AC231657.2-201ENST00000624556 255 ntBASIC21■□□□□ 0.95
PCDH19Q8TAB3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms