Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.54■■□□□ 1.36
PRPF38AQ8NAV1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 AC027702.1-201ENST00000563810 1770 ntBASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 FAM197Y4-202ENST00000622692 608 ntBASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRPF38AQ8NAV1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 AC120498.8-201ENST00000614275 531 ntBASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRPF38AQ8NAV1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 AC008550.1-201ENST00000511500 884 ntBASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRPF38AQ8NAV1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 AC006557.6-201ENST00000623071 864 ntBASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 AL049796.1-201ENST00000565336 1766 ntBASIC23.5■■□□□ 1.35
PRPF38AQ8NAV1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms