Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SLC29A4P1-201ENST00000398760 971 ntBASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 KRT8P36-201ENST00000489121 1440 ntBASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 PGM5P4-201ENST00000421970 445 ntBASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SCUBE3Q8IX30 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 FEM1AP1-201ENST00000431297 1995 ntBASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 AC073314.1-201ENST00000568729 2216 ntBASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.41■■□□□ 1.02
SCUBE3Q8IX30 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 LSM12P1-201ENST00000411836 588 ntBASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 AL138781.1-201ENST00000566567 1274 ntBASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCUBE3Q8IX30 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCUBE3Q8IX30 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCUBE3Q8IX30 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.39■■□□□ 1.02
SCUBE3Q8IX30 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCUBE3Q8IX30 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 AC092667.1-201ENST00000434301 2586 ntBASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 AL589743.5-201ENST00000616611 1050 ntBASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 AC105020.6-201ENST00000621523 1217 ntBASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms