Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 AC073648.6-201ENST00000641589 218 ntBASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC60Q8IWA6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 AC005229.4-201ENST00000610085 2198 ntBASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CCDC60Q8IWA6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
CCDC60Q8IWA6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.7■■□□□ 1.23
CCDC60Q8IWA6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC60Q8IWA6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.69■■□□□ 1.22
CCDC60Q8IWA6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 AL121603.2-201ENST00000557373 2117 ntBASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC60Q8IWA6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 RPS2P52-201ENST00000469610 820 ntBASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 AC066615.1-201ENST00000640911 628 ntBASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC60Q8IWA6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC60Q8IWA6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC60Q8IWA6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CCDC60Q8IWA6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC60Q8IWA6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms