Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 LINC01521-201ENST00000504184 1943 ntBASIC17.13■□□□□ 0.33
FAM90A1Q86YD7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FAM90A1Q86YD7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A1Q86YD7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A1Q86YD7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A1Q86YD7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A1Q86YD7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A1Q86YD7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 AL109923.1-201ENST00000618799 583 ntBASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A1Q86YD7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 AC092720.2-201ENST00000602388 1665 ntBASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 SLC29A4P1-201ENST00000398760 971 ntBASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 HLA-L-209ENST00000420110 1011 ntBASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 AL355472.2-201ENST00000422958 438 ntBASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 CYP2T3P-201ENST00000601990 817 ntBASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 AC104771.1-201ENST00000603335 964 ntBASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 AC020907.5-201ENST00000624372 1936 ntBASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM90A1Q86YD7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 ID1-201ENST00000376105 1233 ntBASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 AL356652.1-201ENST00000615962 565 ntBASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A1Q86YD7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM90A1Q86YD7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms