Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 AC009237.3-201ENST00000393279 1427 ntBASIC18.06■□□□□ 0.48
LRRC28Q86X40 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC28Q86X40 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC28Q86X40 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC28Q86X40 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
LRRC28Q86X40 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 KRT18P5-201ENST00000436075 1291 ntBASIC18.04■□□□□ 0.48
LRRC28Q86X40 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 AC092666.2-201ENST00000613287 246 ntBASIC18.04■□□□□ 0.48
LRRC28Q86X40 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LRRC28Q86X40 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC28Q86X40 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 NTF6G-201ENST00000591094 616 ntBASIC18.03■□□□□ 0.48
LRRC28Q86X40 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC28Q86X40 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms