Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHD1LQ86WJ1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CHD1LQ86WJ1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
CHD1LQ86WJ1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1LQ86WJ1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 AFG3L1P-217ENST00000557444 2447 ntBASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 AC137761.2-201ENST00000561729 223 ntBASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 AC145350.3-201ENST00000569033 163 ntBASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 AL591742.1-201ENST00000604433 565 ntBASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 FAM21FP-204ENST00000608637 956 ntBASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1LQ86WJ1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 RARRES2P6-201ENST00000567333 442 ntBASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1LQ86WJ1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 KRT18P11-201ENST00000435214 1283 ntBASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 MFSD11-216ENST00000590393 1141 ntBASIC25.16■■□□□ 1.62
CHD1LQ86WJ1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 AC007322.4-201ENST00000509611 723 ntBASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 AC016405.3-201ENST00000607710 860 ntBASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1LQ86WJ1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1LQ86WJ1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 TCF3P1-201ENST00000423021 1937 ntBASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1LQ86WJ1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms