Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 AC135279.3-201ENST00000610945 1311 ntBASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 MIR572-201ENST00000384983 95 ntBASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 POU5F1P4-201ENST00000413175 1085 ntBASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRTM1Q86UE6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRTM1Q86UE6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRTM1Q86UE6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 AC008175.2-201ENST00000612840 297 ntBASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM1Q86UE6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 AC027682.1-201ENST00000562846 899 ntBASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM1Q86UE6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 AC098818.2-201ENST00000564925 2320 ntBASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRTM1Q86UE6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms