Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 AC010947.1-201ENST00000623454 693 ntBASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 KRT18P68-201ENST00000392293 1000 ntBASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 AC245052.3-201ENST00000450182 901 ntBASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VPS13BQ7Z7G8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 AL590326.2-201ENST00000625139 305 ntBASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 MCRIP2P1-201ENST00000394346 511 ntBASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 AC079598.2-202ENST00000546624 1451 ntBASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13BQ7Z7G8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 GOLGA2P6-201ENST00000340929 2049 ntBASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 MMP23A-201ENST00000234610 1017 ntBASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms