Protein–RNA interactions for Protein: Q7Z569

BRAP, BRCA1-associated protein, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAPQ7Z569 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BRAPQ7Z569 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BRAPQ7Z569 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 AL162412.1-201ENST00000567129 965 ntBASIC23.35■■□□□ 1.33
BRAPQ7Z569 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
BRAPQ7Z569 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRAPQ7Z569 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BRAPQ7Z569 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BRAPQ7Z569 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BRAPQ7Z569 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
BRAPQ7Z569 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BRAPQ7Z569 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 AC007322.4-201ENST00000509611 723 ntBASIC23.34■■□□□ 1.33
BRAPQ7Z569 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BRAPQ7Z569 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BRAPQ7Z569 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.34■■□□□ 1.33
BRAPQ7Z569 SMG8-203ENST00000578922 2178 ntBASIC23.34■■□□□ 1.33
BRAPQ7Z569 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BRAPQ7Z569 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BRAPQ7Z569 AC112907.3-201ENST00000577781 2400 ntBASIC23.33■■□□□ 1.33
BRAPQ7Z569 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BRAPQ7Z569 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BRAPQ7Z569 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
BRAPQ7Z569 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.33■■□□□ 1.33
BRAPQ7Z569 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BRAPQ7Z569 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
BRAPQ7Z569 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
BRAPQ7Z569 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.32
BRAPQ7Z569 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
BRAPQ7Z569 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.32■■□□□ 1.32
BRAPQ7Z569 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
BRAPQ7Z569 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 PGM5P4-201ENST00000421970 445 ntBASIC23.32■■□□□ 1.32
BRAPQ7Z569 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
BRAPQ7Z569 AC013268.1-206ENST00000638368 961 ntBASIC23.32■■□□□ 1.32
BRAPQ7Z569 AC112229.1-201ENST00000639295 961 ntBASIC23.32■■□□□ 1.32
BRAPQ7Z569 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.32■■□□□ 1.32
BRAPQ7Z569 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.32■■□□□ 1.32
BRAPQ7Z569 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
BRAPQ7Z569 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRAPQ7Z569 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.32■■□□□ 1.32
BRAPQ7Z569 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.31■■□□□ 1.32
BRAPQ7Z569 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.31■■□□□ 1.32
BRAPQ7Z569 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.31■■□□□ 1.32
BRAPQ7Z569 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.31■■□□□ 1.32
BRAPQ7Z569 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.31■■□□□ 1.32
BRAPQ7Z569 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 AC087633.2-202ENST00000565166 1439 ntBASIC23.31■■□□□ 1.32
BRAPQ7Z569 TCF3P1-201ENST00000423021 1937 ntBASIC23.31■■□□□ 1.32
BRAPQ7Z569 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
BRAPQ7Z569 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRAPQ7Z569 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms